Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Arhgef33-207ENSMUST00000224966 490 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col23a1Q8K4G2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Gm5257-201ENSMUST00000121823 790 ntBASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Gm17798-201ENSMUST00000182282 1035 ntBASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 CT030653.1-201ENSMUST00000224382 1279 ntBASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 CT025602.2-201ENSMUST00000226553 772 ntBASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col23a1Q8K4G2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.02
Col23a1Q8K4G2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Col23a1Q8K4G2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm11470-201ENSMUST00000118868 1475 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm18204-201ENSMUST00000209835 793 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gm7959-201ENSMUST00000221823 1078 ntBASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col23a1Q8K4G2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm15036-201ENSMUST00000118880 400 ntBASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.13■□□□□ 0.01
Col23a1Q8K4G2 Gm18367-201ENSMUST00000176139 600 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms