Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim9Q8C7M3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Gm11597-201ENSMUST00000121423 964 ntBASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Gm43433-201ENSMUST00000196573 481 ntBASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Gm5186-201ENSMUST00000218781 920 ntBASIC13.91□□□□□ -0.18
Trim9Q8C7M3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim9Q8C7M3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Gm22018-201ENSMUST00000104357 131 ntBASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Gm13315-201ENSMUST00000120376 991 ntBASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Gm45930-201ENSMUST00000221330 292 ntBASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim9Q8C7M3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trim9Q8C7M3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim9Q8C7M3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim9Q8C7M3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms