Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm6485-201ENSMUST00000160676 439 ntBASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm43186-201ENSMUST00000198130 824 ntBASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm13384-201ENSMUST00000117166 1344 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm13668-201ENSMUST00000119237 1001 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm13328-201ENSMUST00000120816 1020 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm44158-201ENSMUST00000203881 505 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm9873-201ENSMUST00000063891 1097 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Gm18782-201ENSMUST00000209023 1399 ntBASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col16a1Q8BLX7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm28686-201ENSMUST00000187404 609 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm3793-201ENSMUST00000204973 672 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm45575-201ENSMUST00000210283 548 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 AC154176.1-201ENSMUST00000225897 220 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col16a1Q8BLX7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm1848-201ENSMUST00000120711 789 ntBASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm42518-201ENSMUST00000196277 938 ntBASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Gm42657-201ENSMUST00000201746 211 ntBASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col16a1Q8BLX7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms