Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn3Q8BHH8 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm13369-201ENSMUST00000119442 987 ntBASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm8099-201ENSMUST00000200510 742 ntBASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.91□□□□□ -0.5
Clrn3Q8BHH8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Gm16479-201ENSMUST00000121706 932 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Gm26927-201ENSMUST00000182385 965 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Gm4768-201ENSMUST00000206199 686 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clrn3Q8BHH8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms