Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm12314-201ENSMUST00000118104 538 ntBASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm13570-201ENSMUST00000140763 309 ntBASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm29199-201ENSMUST00000187766 775 ntBASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.32□□□□□ -0.44
Ubfd1Q78JW9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm8885-201ENSMUST00000189382 598 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm8712-201ENSMUST00000221090 701 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ubfd1Q78JW9 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm13665-201ENSMUST00000120830 528 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm11597-201ENSMUST00000121423 964 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.3□□□□□ -0.44
Ubfd1Q78JW9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms