Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm13935-201ENSMUST00000121859 798 ntBASIC13.81□□□□□ -0.2
Cln3Q61124 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.81□□□□□ -0.2
Cln3Q61124 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.81□□□□□ -0.2
Cln3Q61124 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.81□□□□□ -0.2
Cln3Q61124 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.81□□□□□ -0.2
Cln3Q61124 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Cln3Q61124 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cln3Q61124 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.81□□□□□ -0.2
Cln3Q61124 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cln3Q61124 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Cln3Q61124 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm24934-201ENSMUST00000103764 111 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm14058-201ENSMUST00000116082 735 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Gm12165-201ENSMUST00000117047 342 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Gm12849-201ENSMUST00000120013 739 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm23119-201ENSMUST00000158610 140 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm44126-201ENSMUST00000204831 514 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Gm45878-201ENSMUST00000211839 241 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.8□□□□□ -0.2
Cln3Q61124 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cln3Q61124 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.8□□□□□ -0.2
Cln3Q61124 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.8□□□□□ -0.2
Cln3Q61124 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cln3Q61124 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cln3Q61124 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.79□□□□□ -0.2
Cln3Q61124 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.79□□□□□ -0.2
Cln3Q61124 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cln3Q61124 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cln3Q61124 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cln3Q61124 Gm13035-201ENSMUST00000117496 342 ntBASIC13.79□□□□□ -0.2
Cln3Q61124 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.79□□□□□ -0.2
Cln3Q61124 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cln3Q61124 Gm27530-201ENSMUST00000184096 98 ntBASIC13.79□□□□□ -0.2
Cln3Q61124 Gm43962-201ENSMUST00000203898 190 ntBASIC13.79□□□□□ -0.2
Cln3Q61124 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cln3Q61124 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cln3Q61124 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.79□□□□□ -0.2
Cln3Q61124 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms