Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm14058-201ENSMUST00000116082 735 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm37835-201ENSMUST00000193305 361 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm270-201ENSMUST00000223010 976 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.79■□□□□ 0.12
Nkx2-3P97334 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-3P97334 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.78■□□□□ 0.12
Nkx2-3P97334 Gm8566-201ENSMUST00000120174 465 ntBASIC15.78■□□□□ 0.12
Nkx2-3P97334 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.78■□□□□ 0.12
Nkx2-3P97334 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC15.78■□□□□ 0.12
Nkx2-3P97334 Mir6546-201ENSMUST00000184460 62 ntBASIC15.78■□□□□ 0.12
Nkx2-3P97334 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-3P97334 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm22133-201ENSMUST00000102082 109 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm7851-201ENSMUST00000117574 323 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm13408-201ENSMUST00000119822 798 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm13461-201ENSMUST00000120980 662 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm12164-201ENSMUST00000121695 551 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm13935-201ENSMUST00000121859 798 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm9550-201ENSMUST00000161130 862 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 CT009738.1-201ENSMUST00000219031 809 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Gm26035-201ENSMUST00000083065 308 ntBASIC15.77■□□□□ 0.12
Nkx2-3P97334 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx2-3P97334 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Nkx2-3P97334 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nkx2-3P97334 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms