Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCD3P28288 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 AC023310.3-201ENST00000557027 670 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 AC100756.1-201ENST00000562736 682 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 AC138749.3-201ENST00000567691 622 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.48□□□□□ -0.09
ABCD3P28288 MIR3197-201ENST00000582241 73 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 AC116165.1-201ENST00000611806 668 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCD3P28288 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ABCD3P28288 AC127383.1-201ENST00000444697 1800 ntBASIC14.48□□□□□ -0.09
ABCD3P28288 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ABCD3P28288 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 AC138969.3-201ENST00000546612 1459 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 AC138932.2-201ENST00000548268 1459 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 AC126755.4-201ENST00000549796 1459 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
ABCD3P28288 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCD3P28288 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 MEP1AP4-201ENST00000423244 1087 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCD3P28288 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCD3P28288 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCD3P28288 AL132655.2-201ENST00000596276 594 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 AL158212.4-201ENST00000624062 1286 ntBASIC14.47□□□□□ -0.09
ABCD3P28288 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCD3P28288 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.47□□□□□ -0.09
ABCD3P28288 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCD3P28288 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.47□□□□□ -0.09
ABCD3P28288 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.47□□□□□ -0.09
ABCD3P28288 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ABCD3P28288 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ABCD3P28288 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 AC007541.1-201ENST00000570282 1469 ntBASIC14.46□□□□□ -0.09
ABCD3P28288 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ABCD3P28288 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCD3P28288 PIN1P1-201ENST00000412108 996 ntBASIC14.46□□□□□ -0.09
ABCD3P28288 DFFBP1-201ENST00000433250 979 ntBASIC14.46□□□□□ -0.09
ABCD3P28288 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCD3P28288 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.46□□□□□ -0.09
ABCD3P28288 RARRES2P5-201ENST00000564013 466 ntBASIC14.46□□□□□ -0.09
ABCD3P28288 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCD3P28288 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.46□□□□□ -0.09
ABCD3P28288 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.46□□□□□ -0.09
ABCD3P28288 AC138761.1-201ENST00000584393 385 ntBASIC14.46□□□□□ -0.09
ABCD3P28288 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.46□□□□□ -0.09
ABCD3P28288 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.46□□□□□ -0.09
ABCD3P28288 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ABCD3P28288 AC105250.1-201ENST00000509378 2057 ntBASIC14.46□□□□□ -0.09
ABCD3P28288 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCD3P28288 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ABCD3P28288 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ABCD3P28288 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ABCD3P28288 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms