Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxb3P09026 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxb3P09026 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxb3P09026 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxb3P09026 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxb3P09026 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Hoxb3P09026 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.69□□□□□ -0.38
Hoxb3P09026 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.69□□□□□ -0.38
Hoxb3P09026 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.69□□□□□ -0.38
Hoxb3P09026 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxb3P09026 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm23270-201ENSMUST00000104055 131 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm15036-201ENSMUST00000118880 400 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm19931-201ENSMUST00000198920 368 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.68□□□□□ -0.38
Hoxb3P09026 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxb3P09026 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxb3P09026 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Gm16112-201ENSMUST00000159075 382 ntBASIC12.67□□□□□ -0.38
Hoxb3P09026 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.67□□□□□ -0.38
Hoxb3P09026 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.67□□□□□ -0.38
Hoxb3P09026 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxb3P09026 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.67□□□□□ -0.38
Hoxb3P09026 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxb3P09026 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms