Protein–RNA interactions for Protein: P01801

Ig heavy chain V-III region J606, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01801 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P01801 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01801 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P01801 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01801 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01801 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01801 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01801 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.23□□□□□ -0.77
P01801 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01801 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.22□□□□□ -0.77
P01801 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
P01801 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.22□□□□□ -0.77
P01801 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Gm5363-201ENSMUST00000211927 938 ntBASIC10.22□□□□□ -0.77
P01801 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.22□□□□□ -0.77
P01801 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.22□□□□□ -0.77
P01801 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.22□□□□□ -0.77
P01801 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
P01801 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.22□□□□□ -0.77
P01801 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P01801 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
P01801 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.21□□□□□ -0.77
P01801 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.21□□□□□ -0.77
P01801 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Gm15276-201ENSMUST00000145953 498 ntBASIC10.21□□□□□ -0.77
P01801 Gm17376-201ENSMUST00000166016 84 ntBASIC10.21□□□□□ -0.77
P01801 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
P01801 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.21□□□□□ -0.77
P01801 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.21□□□□□ -0.77
P01801 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.21□□□□□ -0.77
P01801 Gm37466-201ENSMUST00000195692 652 ntBASIC10.21□□□□□ -0.77
P01801 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.21□□□□□ -0.77
P01801 Gm13097-201ENSMUST00000210722 397 ntBASIC10.21□□□□□ -0.77
P01801 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P01801 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.21□□□□□ -0.77
P01801 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
P01801 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.21□□□□□ -0.78
P01801 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.21□□□□□ -0.78
P01801 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
P01801 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms