Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gm42599-201ENSMUST00000201308 469 ntBASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gm6443-201ENSMUST00000203599 874 ntBASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Gm18027-201ENSMUST00000218947 619 ntBASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-2D3Z4R4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Gm5177-201ENSMUST00000183092 997 ntBASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-2D3Z4R4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-2D3Z4R4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms