Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm45612-201ENSMUST00000211320 160 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav8-1A0A075B641 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm9824-201ENSMUST00000178707 561 ntBASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm44124-201ENSMUST00000204159 472 ntBASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm9025-201ENSMUST00000122415 1575 ntBASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 AC113060.1-201ENSMUST00000225689 1573 ntBASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav8-1A0A075B641 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms