Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm17208-201ENSMUST00000168388 535 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm37042-201ENSMUST00000193816 581 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm18187-201ENSMUST00000196476 984 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm6266-201ENSMUST00000203844 806 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClcnkaQ9WUB7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm15824-201ENSMUST00000119516 955 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm16177-201ENSMUST00000120728 718 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm43818-201ENSMUST00000200605 466 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClcnkaQ9WUB7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms