Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm44124-201ENSMUST00000204159 472 ntBASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc38Q8CDN8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Gm22331-201ENSMUST00000158066 136 ntBASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Gm27331-201ENSMUST00000183705 60 ntBASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Gm9794-201ENSMUST00000202370 423 ntBASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc38Q8CDN8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gm12490-201ENSMUST00000120255 560 ntBASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 AC124577.2-201ENSMUST00000217413 2420 ntBASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc38Q8CDN8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Gm15991-202ENSMUST00000212123 3565 ntBASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ccdc38Q8CDN8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms