Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.54□□□□□ -0.4
Lrif1Q8CDD9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lrif1Q8CDD9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lrif1Q8CDD9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Gm27390-201ENSMUST00000184516 176 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Gm5161-201ENSMUST00000075243 853 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lrif1Q8CDD9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lrif1Q8CDD9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms