Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm16177-201ENSMUST00000120728 718 ntBASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gm38092-201ENSMUST00000195600 653 ntBASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gm44124-201ENSMUST00000204159 472 ntBASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gm4768-201ENSMUST00000206199 686 ntBASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc116Q80X53 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm15703-201ENSMUST00000120250 880 ntBASIC12.4□□□□□ -0.42
Ccdc116Q80X53 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm29127-201ENSMUST00000188304 517 ntBASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc116Q80X53 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc116Q80X53 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc116Q80X53 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.4□□□□□ -0.43
Ccdc116Q80X53 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.4□□□□□ -0.43
Ccdc116Q80X53 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc116Q80X53 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc116Q80X53 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm27682-201ENSMUST00000183930 110 ntBASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm43339-201ENSMUST00000200032 1606 ntBASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms