Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vrk1Q80X41 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Rubie-203ENSMUST00000227803 2430 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm14028-201ENSMUST00000117434 479 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm14921-201ENSMUST00000118643 908 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm25043-201ENSMUST00000158604 212 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm8885-201ENSMUST00000189382 598 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Nsd1-205ENSMUST00000224693 852 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.11□□□□□ -0.47
Vrk1Q80X41 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vrk1Q80X41 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Vrk1Q80X41 Gm4909-201ENSMUST00000118749 794 ntBASIC12.1□□□□□ -0.47
Vrk1Q80X41 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms