Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Gm35960-201ENSMUST00000202712 767 ntBASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scaf4Q6PFF0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scaf4Q6PFF0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm14704-201ENSMUST00000120300 874 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm15429-201ENSMUST00000151268 798 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Mir6956-201ENSMUST00000183598 62 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm15823-201ENSMUST00000064305 670 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.45□□□□□ -0.42
Scaf4Q6PFF0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.44□□□□□ -0.42
Scaf4Q6PFF0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms