Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cul4aQ3TCH7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cul4aQ3TCH7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cul4aQ3TCH7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cul4aQ3TCH7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cul4aQ3TCH7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cul4aQ3TCH7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cul4aQ3TCH7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm13369-201ENSMUST00000119442 987 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm26185-201ENSMUST00000157692 266 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm45384-201ENSMUST00000210451 277 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cul4aQ3TCH7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Gm38092-201ENSMUST00000195600 653 ntBASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Gm6180-201ENSMUST00000065243 498 ntBASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cul4aQ3TCH7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms