Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Lsm6P62313 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Lsm6P62313 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Lsm6P62313 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Lsm6P62313 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Lsm6P62313 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Lsm6P62313 Gm27682-201ENSMUST00000183930 110 ntBASIC11.12□□□□□ -0.63
Lsm6P62313 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.12□□□□□ -0.63
Lsm6P62313 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.12□□□□□ -0.63
Lsm6P62313 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.12□□□□□ -0.63
Lsm6P62313 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Lsm6P62313 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm6P62313 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.12□□□□□ -0.63
Lsm6P62313 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm6P62313 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm6P62313 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Lsm6P62313 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm12390-201ENSMUST00000117897 397 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm1335-201ENSMUST00000121653 386 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Gm11424-201ENSMUST00000121929 829 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm17150-201ENSMUST00000165577 381 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lsm6P62313 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm6P62313 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.11□□□□□ -0.63
Lsm6P62313 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm6P62313 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.11□□□□□ -0.63
Lsm6P62313 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms