Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.25□□□□□ -0.61
Sf3b6P59708 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.25□□□□□ -0.61
Sf3b6P59708 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sf3b6P59708 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3b6P59708 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.24□□□□□ -0.61
Sf3b6P59708 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Sf3b6P59708 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.24□□□□□ -0.61
Sf3b6P59708 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sf3b6P59708 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Gm14350-201ENSMUST00000116642 640 ntBASIC11.23□□□□□ -0.61
Sf3b6P59708 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.23□□□□□ -0.61
Sf3b6P59708 Gm5354-201ENSMUST00000182417 973 ntBASIC11.23□□□□□ -0.61
Sf3b6P59708 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.23□□□□□ -0.61
Sf3b6P59708 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.23□□□□□ -0.61
Sf3b6P59708 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sf3b6P59708 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sf3b6P59708 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms