Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.49□□□□□ -0.73
Nkx2-1P50220 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nkx2-1P50220 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.48□□□□□ -0.73
Nkx2-1P50220 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gm20445-201ENSMUST00000061905 565 ntBASIC10.48□□□□□ -0.73
Nkx2-1P50220 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.48□□□□□ -0.73
Nkx2-1P50220 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nkx2-1P50220 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.47□□□□□ -0.73
Nkx2-1P50220 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Nkx2-1P50220 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms