Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CLK1P49759 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 AC091812.2-201ENST00000619081 385 ntBASIC14.88□□□□□ -0.03
CLK1P49759 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 AC104581.4-201ENST00000623126 3052 ntBASIC14.88□□□□□ -0.03
CLK1P49759 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 AC016027.1-202ENST00000607927 1699 ntBASIC14.87□□□□□ -0.03
CLK1P49759 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 AL359258.3-201ENST00000622910 2331 ntBASIC14.87□□□□□ -0.03
CLK1P49759 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 AC069224.1-201ENST00000566372 1715 ntBASIC14.87□□□□□ -0.03
CLK1P49759 TMBIM7P-203ENST00000641617 1718 ntBASIC14.87□□□□□ -0.03
CLK1P49759 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 AC005089.1-201ENST00000619486 2241 ntBASIC14.87□□□□□ -0.03
CLK1P49759 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.87□□□□□ -0.03
CLK1P49759 FAM58CP-201ENST00000435741 640 ntBASIC14.87□□□□□ -0.03
CLK1P49759 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.87□□□□□ -0.03
CLK1P49759 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.87□□□□□ -0.03
CLK1P49759 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.87□□□□□ -0.03
CLK1P49759 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.87□□□□□ -0.03
CLK1P49759 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CLK1P49759 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLK1P49759 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLK1P49759 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLK1P49759 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.86□□□□□ -0.03
CLK1P49759 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.86□□□□□ -0.03
CLK1P49759 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.86□□□□□ -0.03
CLK1P49759 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.86□□□□□ -0.03
CLK1P49759 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLK1P49759 YBX2P1-201ENST00000394192 760 ntBASIC14.86□□□□□ -0.03
CLK1P49759 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.86□□□□□ -0.03
CLK1P49759 AL671277.1-201ENST00000429656 993 ntBASIC14.86□□□□□ -0.03
CLK1P49759 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms