Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Col8a2P25318 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a2P25318 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Col8a2P25318 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Col8a2P25318 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.56□□□□□ -0.72
Col8a2P25318 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Col8a2P25318 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.55□□□□□ -0.72
Col8a2P25318 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Col8a2P25318 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.55□□□□□ -0.72
Col8a2P25318 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Col8a2P25318 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm15808-201ENSMUST00000119046 604 ntBASIC10.55□□□□□ -0.72
Col8a2P25318 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.55□□□□□ -0.72
Col8a2P25318 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm4857-201ENSMUST00000192718 785 ntBASIC10.55□□□□□ -0.72
Col8a2P25318 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Col8a2P25318 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.55□□□□□ -0.72
Col8a2P25318 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.55□□□□□ -0.72
Col8a2P25318 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Col8a2P25318 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.54□□□□□ -0.72
Col8a2P25318 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.54□□□□□ -0.72
Col8a2P25318 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Gm13315-201ENSMUST00000120376 991 ntBASIC10.54□□□□□ -0.72
Col8a2P25318 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.54□□□□□ -0.72
Col8a2P25318 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.54□□□□□ -0.72
Col8a2P25318 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.54□□□□□ -0.72
Col8a2P25318 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Col8a2P25318 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Col8a2P25318 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Col8a2P25318 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.54□□□□□ -0.72
Col8a2P25318 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Col8a2P25318 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Col8a2P25318 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.54□□□□□ -0.72
Col8a2P25318 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Col8a2P25318 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.53□□□□□ -0.72
Col8a2P25318 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.53□□□□□ -0.72
Col8a2P25318 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.53□□□□□ -0.72
Col8a2P25318 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.53□□□□□ -0.72
Col8a2P25318 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.53□□□□□ -0.72
Col8a2P25318 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms