Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cbx3P23198 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cbx3P23198 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cbx3P23198 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.52□□□□□ -0.57
Cbx3P23198 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cbx3P23198 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cbx3P23198 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.52□□□□□ -0.57
Cbx3P23198 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cbx3P23198 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Cbx3P23198 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cbx3P23198 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.51□□□□□ -0.57
Cbx3P23198 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Mir874-201ENSMUST00000104769 76 ntBASIC11.51□□□□□ -0.57
Cbx3P23198 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cbx3P23198 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.51□□□□□ -0.57
Cbx3P23198 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.51□□□□□ -0.57
Cbx3P23198 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cbx3P23198 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cbx3P23198 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cbx3P23198 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cbx3P23198 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cbx3P23198 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Cbx3P23198 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cbx3P23198 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.5□□□□□ -0.57
Cbx3P23198 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.5□□□□□ -0.57
Cbx3P23198 Gm43514-201ENSMUST00000198852 424 ntBASIC11.5□□□□□ -0.57
Cbx3P23198 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.5□□□□□ -0.57
Cbx3P23198 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.5□□□□□ -0.57
Cbx3P23198 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cbx3P23198 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.5□□□□□ -0.57
Cbx3P23198 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cbx3P23198 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms