Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
IghmP01872 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
IghmP01872 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.84□□□□□ -0.51
IghmP01872 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Gm11964-201ENSMUST00000120982 444 ntBASIC11.84□□□□□ -0.51
IghmP01872 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Gm7063-201ENSMUST00000186840 981 ntBASIC11.84□□□□□ -0.51
IghmP01872 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.84□□□□□ -0.51
IghmP01872 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.84□□□□□ -0.51
IghmP01872 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
IghmP01872 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
IghmP01872 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.83□□□□□ -0.51
IghmP01872 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.83□□□□□ -0.52
IghmP01872 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
IghmP01872 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
IghmP01872 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.83□□□□□ -0.52
IghmP01872 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
IghmP01872 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.83□□□□□ -0.52
IghmP01872 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.83□□□□□ -0.52
IghmP01872 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
IghmP01872 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.83□□□□□ -0.52
IghmP01872 Gm26927-201ENSMUST00000182385 965 ntBASIC11.83□□□□□ -0.52
IghmP01872 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.83□□□□□ -0.52
IghmP01872 Gm9794-201ENSMUST00000202370 423 ntBASIC11.83□□□□□ -0.52
IghmP01872 Gm7561-201ENSMUST00000211203 886 ntBASIC11.83□□□□□ -0.52
IghmP01872 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
IghmP01872 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
IghmP01872 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.83□□□□□ -0.52
IghmP01872 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
IghmP01872 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
IghmP01872 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.82□□□□□ -0.52
IghmP01872 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.82□□□□□ -0.52
IghmP01872 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
IghmP01872 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms