Protein–RNA interactions for Protein: O88700

Blm, Bloom syndrome protein homolog, mousemouse

Predictions only

Length 1,416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BlmO88700 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BlmO88700 Gm13611-201ENSMUST00000118269 318 ntBASIC19.31■□□□□ 0.68
BlmO88700 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 Gm27530-201ENSMUST00000184096 98 ntBASIC19.31■□□□□ 0.68
BlmO88700 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC19.31■□□□□ 0.68
BlmO88700 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BlmO88700 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC19.31■□□□□ 0.68
BlmO88700 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BlmO88700 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Gm45638-201ENSMUST00000211507 2878 ntBASIC19.3■□□□□ 0.68
BlmO88700 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
BlmO88700 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
BlmO88700 Retreg1-206ENSMUST00000228306 1430 ntBASIC19.3■□□□□ 0.68
BlmO88700 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC19.3■□□□□ 0.68
BlmO88700 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
BlmO88700 Mir680-2-201ENSMUST00000102163 110 ntBASIC19.3■□□□□ 0.68
BlmO88700 Gm23251-201ENSMUST00000103773 110 ntBASIC19.3■□□□□ 0.68
BlmO88700 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BlmO88700 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC19.3■□□□□ 0.68
BlmO88700 Gm14760-201ENSMUST00000121831 999 ntBASIC19.3■□□□□ 0.68
BlmO88700 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC19.3■□□□□ 0.68
BlmO88700 Gm10051-201ENSMUST00000145209 414 ntBASIC19.3■□□□□ 0.68
BlmO88700 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC19.3■□□□□ 0.68
BlmO88700 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.3■□□□□ 0.68
BlmO88700 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BlmO88700 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BlmO88700 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 AC151895.1-201ENSMUST00000219025 1742 ntBASIC19.29■□□□□ 0.68
BlmO88700 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BlmO88700 Gm14058-201ENSMUST00000116082 735 ntBASIC19.29■□□□□ 0.68
BlmO88700 Gm11989-201ENSMUST00000117240 672 ntBASIC19.29■□□□□ 0.68
BlmO88700 Gm11362-201ENSMUST00000118838 850 ntBASIC19.29■□□□□ 0.68
BlmO88700 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.29■□□□□ 0.68
BlmO88700 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC19.29■□□□□ 0.68
BlmO88700 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Mir6546-201ENSMUST00000184460 62 ntBASIC19.29■□□□□ 0.68
BlmO88700 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC19.29■□□□□ 0.68
BlmO88700 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
BlmO88700 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC19.29■□□□□ 0.68
BlmO88700 Gm45219-201ENSMUST00000205602 465 ntBASIC19.29■□□□□ 0.68
BlmO88700 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BlmO88700 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BlmO88700 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
BlmO88700 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BlmO88700 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC19.28■□□□□ 0.68
BlmO88700 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.28■□□□□ 0.68
BlmO88700 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 AC238940.1-201ENSMUST00000225106 1858 ntBASIC19.28■□□□□ 0.68
BlmO88700 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BlmO88700 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BlmO88700 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BlmO88700 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BlmO88700 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BlmO88700 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BlmO88700 Gm5638-201ENSMUST00000118618 1258 ntBASIC19.27■□□□□ 0.68
BlmO88700 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms