Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm17827-201ENSMUST00000211825 742 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Rubie-203ENSMUST00000227803 2430 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
OtofQ9ESF1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Mir3547-201ENSMUST00000175461 88 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm28882-201ENSMUST00000185504 314 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm26035-201ENSMUST00000083065 308 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.5□□□□□ -0.41
OtofQ9ESF1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
OtofQ9ESF1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.49□□□□□ -0.41
OtofQ9ESF1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Mir5132-201ENSMUST00000175166 71 ntBASIC12.49□□□□□ -0.41
OtofQ9ESF1 Mir6979-201ENSMUST00000183927 56 ntBASIC12.49□□□□□ -0.41
OtofQ9ESF1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.49□□□□□ -0.41
OtofQ9ESF1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
OtofQ9ESF1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms