Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lysmd1Q9D0E3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Gm12579-201ENSMUST00000118040 783 ntBASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Gm12736-201ENSMUST00000119330 236 ntBASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Gm9797-202ENSMUST00000218003 294 ntBASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.39□□□□□ -0.27
Lysmd1Q9D0E3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm26286-201ENSMUST00000104166 134 ntBASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm22379-201ENSMUST00000157480 131 ntBASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd1Q9D0E3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Gm18367-201ENSMUST00000176139 600 ntBASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Gm7627-201ENSMUST00000183205 999 ntBASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Gm9791-201ENSMUST00000060997 447 ntBASIC13.37□□□□□ -0.27
Lysmd1Q9D0E3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms