Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chd1lQ9CXF7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Gm14350-201ENSMUST00000116642 640 ntBASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Gm10576-201ENSMUST00000191927 825 ntBASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chd1lQ9CXF7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd1lQ9CXF7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Gm13689-201ENSMUST00000119360 685 ntBASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Gm6458-201ENSMUST00000211573 635 ntBASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Gm8227-201ENSMUST00000223306 571 ntBASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd1lQ9CXF7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms