Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.49□□□□□ -0.09
Trex1Q91XB0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.49□□□□□ -0.09
Trex1Q91XB0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.49□□□□□ -0.09
Trex1Q91XB0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.49□□□□□ -0.09
Trex1Q91XB0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trex1Q91XB0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm22902-201ENSMUST00000158488 302 ntBASIC14.48□□□□□ -0.09
Trex1Q91XB0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm27552-201ENSMUST00000183351 62 ntBASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm27844-201ENSMUST00000183613 62 ntBASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm18304-201ENSMUST00000189162 546 ntBASIC14.48□□□□□ -0.09
Trex1Q91XB0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.48□□□□□ -0.09
Trex1Q91XB0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.48□□□□□ -0.09
Trex1Q91XB0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trex1Q91XB0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trex1Q91XB0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.47□□□□□ -0.09
Trex1Q91XB0 Gm37986-201ENSMUST00000193285 383 ntBASIC14.47□□□□□ -0.09
Trex1Q91XB0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.47□□□□□ -0.09
Trex1Q91XB0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trex1Q91XB0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trex1Q91XB0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms