Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim52Q8CDV4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Mir3547-201ENSMUST00000175461 88 ntBASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim52Q8CDV4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm15711-201ENSMUST00000118889 535 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm12176-201ENSMUST00000121420 875 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm18734-201ENSMUST00000172937 808 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Gm7848-201ENSMUST00000210739 718 ntBASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim52Q8CDV4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Gm43962-201ENSMUST00000203898 190 ntBASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms