Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Alx1Q8C8B0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Gm28882-201ENSMUST00000185504 314 ntBASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Gm44364-201ENSMUST00000198368 141 ntBASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.76□□□□□ -0.05
Alx1Q8C8B0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Olfr582-201ENSMUST00000098212 960 ntBASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Alx1Q8C8B0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Gm8712-201ENSMUST00000221090 701 ntBASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Alx1Q8C8B0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm23270-201ENSMUST00000104055 131 ntBASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm7584-201ENSMUST00000175829 940 ntBASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm8885-201ENSMUST00000189382 598 ntBASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Alx1Q8C8B0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms