Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.71□□□□□ -0.69
Rif1Q6PR54 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Gm15352-201ENSMUST00000118696 270 ntBASIC10.71□□□□□ -0.69
Rif1Q6PR54 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Gm6485-201ENSMUST00000160676 439 ntBASIC10.71□□□□□ -0.69
Rif1Q6PR54 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rif1Q6PR54 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.71□□□□□ -0.7
Rif1Q6PR54 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm25226-201ENSMUST00000158198 123 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm8018-201ENSMUST00000173536 789 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Mir7677-201ENSMUST00000184226 67 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm5870-201ENSMUST00000196461 282 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm29763-201ENSMUST00000205306 616 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm16380-201ENSMUST00000077997 478 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.7□□□□□ -0.7
Rif1Q6PR54 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rif1Q6PR54 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.7□□□□□ -0.7
Rif1Q6PR54 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.69□□□□□ -0.7
Rif1Q6PR54 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.69□□□□□ -0.7
Rif1Q6PR54 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms