Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm43433-201ENSMUST00000196573 481 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm6458-201ENSMUST00000211573 635 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Daam2-202ENSMUST00000224595 1926 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.54□□□□□ -0.4
Scn2bQ56A07 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn2bQ56A07 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.53□□□□□ -0.4
Scn2bQ56A07 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.53□□□□□ -0.4
Scn2bQ56A07 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.53□□□□□ -0.4
Scn2bQ56A07 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.53□□□□□ -0.4
Scn2bQ56A07 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scn2bQ56A07 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scn2bQ56A07 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Gm27847-201ENSMUST00000183711 107 ntBASIC12.52□□□□□ -0.41
Scn2bQ56A07 Gm27375-201ENSMUST00000183799 107 ntBASIC12.52□□□□□ -0.41
Scn2bQ56A07 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Gm8598-201ENSMUST00000221184 836 ntBASIC12.52□□□□□ -0.41
Scn2bQ56A07 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scn2bQ56A07 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms