Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cnga4Q3UW12 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm11594-201ENSMUST00000122313 162 ntBASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm8396-201ENSMUST00000057361 823 ntBASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cnga4Q3UW12 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm21854-201ENSMUST00000179901 471 ntBASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm38223-201ENSMUST00000194484 695 ntBASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cnga4Q3UW12 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms