Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm22594-201ENSMUST00000104251 130 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm19030-201ENSMUST00000194947 552 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm42452-201ENSMUST00000199749 617 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm19175-201ENSMUST00000199895 916 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a1Q05722 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.63□□□□□ -0.39
Col9a1Q05722 BC106175-202ENSMUST00000219344 1213 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col9a1Q05722 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.63□□□□□ -0.39
Col9a1Q05722 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col9a1Q05722 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col9a1Q05722 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm13624-201ENSMUST00000120263 462 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm6485-201ENSMUST00000160676 439 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm4462-201ENSMUST00000166453 492 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm6047-201ENSMUST00000167221 574 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm24111-201ENSMUST00000175491 97 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm37355-201ENSMUST00000193345 606 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm37299-201ENSMUST00000193951 826 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm4482-201ENSMUST00000200876 742 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Gm2875-201ENSMUST00000211333 360 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col9a1Q05722 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Col9a1Q05722 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col9a1Q05722 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col9a1Q05722 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col9a1Q05722 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.61□□□□□ -0.39
Col9a1Q05722 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.61□□□□□ -0.39
Col9a1Q05722 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Col9a1Q05722 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col9a1Q05722 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC12.61□□□□□ -0.39
Col9a1Q05722 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Col9a1Q05722 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col9a1Q05722 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms