Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm25043-201ENSMUST00000158604 212 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm45219-201ENSMUST00000205602 465 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm45433-201ENSMUST00000209386 247 ntBASIC14.02□□□□□ -0.17
Col6a1Q04857 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a1Q04857 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Col6a1Q04857 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col6a1Q04857 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a1Q04857 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col6a1Q04857 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col6a1Q04857 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 Gm24749-201ENSMUST00000157838 343 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 Gm8194-201ENSMUST00000159783 859 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Gm18734-201ENSMUST00000172937 808 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Col6a1Q04857 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Gm8285-201ENSMUST00000208293 759 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a1Q04857 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.01□□□□□ -0.17
Col6a1Q04857 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a1Q04857 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a1Q04857 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Col6a1Q04857 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col6a1Q04857 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Gm13296-201ENSMUST00000117854 997 ntBASIC14□□□□□ -0.17
Col6a1Q04857 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14□□□□□ -0.17
Col6a1Q04857 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14□□□□□ -0.17
Col6a1Q04857 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14□□□□□ -0.17
Col6a1Q04857 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14□□□□□ -0.17
Col6a1Q04857 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a1Q04857 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Col6a1Q04857 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Daam2-202ENSMUST00000224595 1926 ntBASIC14□□□□□ -0.17
Col6a1Q04857 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a1Q04857 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a1Q04857 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a1Q04857 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.99□□□□□ -0.17
Col6a1Q04857 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a1Q04857 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms