Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.15□□□□□ -0.14
Tpm1P58771 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.15□□□□□ -0.14
Tpm1P58771 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.15□□□□□ -0.14
Tpm1P58771 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tpm1P58771 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Tpm1P58771 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tpm1P58771 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tpm1P58771 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tpm1P58771 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tpm1P58771 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.14□□□□□ -0.15
Tpm1P58771 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.14□□□□□ -0.15
Tpm1P58771 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tpm1P58771 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.14□□□□□ -0.15
Tpm1P58771 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.14□□□□□ -0.15
Tpm1P58771 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.14□□□□□ -0.15
Tpm1P58771 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Tpm1P58771 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tpm1P58771 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tpm1P58771 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tpm1P58771 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Gm15371-201ENSMUST00000117057 784 ntBASIC14.13□□□□□ -0.15
Tpm1P58771 Gm13616-201ENSMUST00000120600 222 ntBASIC14.13□□□□□ -0.15
Tpm1P58771 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.13□□□□□ -0.15
Tpm1P58771 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Tpm1P58771 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Cog3-203ENSMUST00000227473 4197 ntBASIC14.13□□□□□ -0.15
Tpm1P58771 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tpm1P58771 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.13□□□□□ -0.15
Tpm1P58771 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm1P58771 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.12□□□□□ -0.15
Tpm1P58771 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.12□□□□□ -0.15
Tpm1P58771 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm1P58771 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm1P58771 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.12□□□□□ -0.15
Tpm1P58771 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms