Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm12217-201ENSMUST00000118858 696 ntBASIC13.51□□□□□ -0.25
NrlP54846 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.51□□□□□ -0.25
NrlP54846 Gm12176-201ENSMUST00000121420 875 ntBASIC13.51□□□□□ -0.25
NrlP54846 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Gm25043-201ENSMUST00000158604 212 ntBASIC13.51□□□□□ -0.25
NrlP54846 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NrlP54846 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.51□□□□□ -0.25
NrlP54846 Gm45925-201ENSMUST00000218882 744 ntBASIC13.51□□□□□ -0.25
NrlP54846 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.51□□□□□ -0.25
NrlP54846 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NrlP54846 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NrlP54846 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NrlP54846 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NrlP54846 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NrlP54846 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NrlP54846 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
NrlP54846 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NrlP54846 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.5□□□□□ -0.25
NrlP54846 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.5□□□□□ -0.25
NrlP54846 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.5□□□□□ -0.25
NrlP54846 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.5□□□□□ -0.25
NrlP54846 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NrlP54846 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.5□□□□□ -0.25
NrlP54846 Mir6927-201ENSMUST00000184494 71 ntBASIC13.5□□□□□ -0.25
NrlP54846 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.5□□□□□ -0.25
NrlP54846 Gm19931-201ENSMUST00000198920 368 ntBASIC13.5□□□□□ -0.25
NrlP54846 Gm44405-201ENSMUST00000198952 126 ntBASIC13.5□□□□□ -0.25
NrlP54846 Gm8712-201ENSMUST00000221090 701 ntBASIC13.5□□□□□ -0.25
NrlP54846 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.5□□□□□ -0.25
NrlP54846 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.5□□□□□ -0.25
NrlP54846 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.5□□□□□ -0.25
NrlP54846 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NrlP54846 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NrlP54846 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.49□□□□□ -0.25
NrlP54846 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.49□□□□□ -0.25
NrlP54846 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.49□□□□□ -0.25
NrlP54846 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Mir874-201ENSMUST00000104769 76 ntBASIC13.49□□□□□ -0.25
NrlP54846 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NrlP54846 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.49□□□□□ -0.25
NrlP54846 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Gm12566-201ENSMUST00000121479 359 ntBASIC13.49□□□□□ -0.25
NrlP54846 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.49□□□□□ -0.25
NrlP54846 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NrlP54846 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NrlP54846 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.49□□□□□ -0.25
NrlP54846 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NrlP54846 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms