Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.62□□□□□ -0.39
Atxn1P54254 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.62□□□□□ -0.39
Atxn1P54254 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Atxn1P54254 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Gm27552-201ENSMUST00000183351 62 ntBASIC12.62□□□□□ -0.39
Atxn1P54254 Gm27844-201ENSMUST00000183613 62 ntBASIC12.62□□□□□ -0.39
Atxn1P54254 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.62□□□□□ -0.39
Atxn1P54254 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.62□□□□□ -0.39
Atxn1P54254 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.62□□□□□ -0.39
Atxn1P54254 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.62□□□□□ -0.39
Atxn1P54254 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atxn1P54254 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Atxn1P54254 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Gm9062-201ENSMUST00000117712 727 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm11667-201ENSMUST00000119828 486 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.61□□□□□ -0.39
Atxn1P54254 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm3096-201ENSMUST00000185770 364 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Gm28693-202ENSMUST00000190758 331 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.61□□□□□ -0.39
Atxn1P54254 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.61□□□□□ -0.39
Atxn1P54254 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Atxn1P54254 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Atxn1P54254 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Atxn1P54254 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Atxn1P54254 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.6□□□□□ -0.39
Atxn1P54254 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.6□□□□□ -0.39
Atxn1P54254 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.6□□□□□ -0.39
Atxn1P54254 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.6□□□□□ -0.39
Atxn1P54254 Gm17208-201ENSMUST00000168388 535 ntBASIC12.6□□□□□ -0.39
Atxn1P54254 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atxn1P54254 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.6□□□□□ -0.39
Atxn1P54254 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.6□□□□□ -0.39
Atxn1P54254 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.6□□□□□ -0.39
Atxn1P54254 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Atxn1P54254 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Atxn1P54254 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Atxn1P54254 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms