Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Fdft1P53798 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Fdft1P53798 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.69□□□□□ -0.38
Fdft1P53798 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Fdft1P53798 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Fdft1P53798 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.68□□□□□ -0.38
Fdft1P53798 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Fdft1P53798 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm12203-201ENSMUST00000118235 598 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Gm12209-201ENSMUST00000120089 596 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.68□□□□□ -0.38
Fdft1P53798 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.68□□□□□ -0.38
Fdft1P53798 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm27486-201ENSMUST00000184923 80 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.68□□□□□ -0.38
Fdft1P53798 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.68□□□□□ -0.38
Fdft1P53798 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm10012-201ENSMUST00000078252 192 ntBASIC12.68□□□□□ -0.38
Fdft1P53798 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fdft1P53798 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.68□□□□□ -0.38
Fdft1P53798 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Fdft1P53798 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Fdft1P53798 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Fdft1P53798 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.67□□□□□ -0.38
Fdft1P53798 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Gm11814-201ENSMUST00000119515 929 ntBASIC12.67□□□□□ -0.38
Fdft1P53798 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.67□□□□□ -0.38
Fdft1P53798 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.67□□□□□ -0.38
Fdft1P53798 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Gm27839-201ENSMUST00000184242 106 ntBASIC12.67□□□□□ -0.38
Fdft1P53798 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.67□□□□□ -0.38
Fdft1P53798 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.67□□□□□ -0.38
Fdft1P53798 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.67□□□□□ -0.38
Fdft1P53798 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fdft1P53798 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fdft1P53798 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fdft1P53798 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.66□□□□□ -0.38
Fdft1P53798 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
Fdft1P53798 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fdft1P53798 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Fdft1P53798 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms