Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.03□□□□□ -0.48
RoraP51448 Gm38092-201ENSMUST00000195600 653 ntBASIC12.03□□□□□ -0.48
RoraP51448 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.03□□□□□ -0.48
RoraP51448 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.03□□□□□ -0.48
RoraP51448 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.03□□□□□ -0.48
RoraP51448 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RoraP51448 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.03□□□□□ -0.48
RoraP51448 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RoraP51448 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RoraP51448 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
RoraP51448 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.02□□□□□ -0.49
RoraP51448 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
RoraP51448 Gm23363-201ENSMUST00000175024 79 ntBASIC12.02□□□□□ -0.49
RoraP51448 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.02□□□□□ -0.49
RoraP51448 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.02□□□□□ -0.49
RoraP51448 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.02□□□□□ -0.49
RoraP51448 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RoraP51448 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.02□□□□□ -0.49
RoraP51448 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RoraP51448 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.02□□□□□ -0.49
RoraP51448 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RoraP51448 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RoraP51448 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.01□□□□□ -0.49
RoraP51448 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.01□□□□□ -0.49
RoraP51448 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.01□□□□□ -0.49
RoraP51448 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.01□□□□□ -0.49
RoraP51448 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 Mir877-201ENSMUST00000104738 85 ntBASIC12.01□□□□□ -0.49
RoraP51448 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Gm14921-201ENSMUST00000118643 908 ntBASIC12.01□□□□□ -0.49
RoraP51448 Gm15808-201ENSMUST00000119046 604 ntBASIC12.01□□□□□ -0.49
RoraP51448 Gm13492-201ENSMUST00000119772 665 ntBASIC12.01□□□□□ -0.49
RoraP51448 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RoraP51448 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.01□□□□□ -0.49
RoraP51448 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.01□□□□□ -0.49
RoraP51448 Gm17376-201ENSMUST00000166016 84 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms