Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.13□□□□□ -0.47
Hoxb9P20615 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Gm8738-201ENSMUST00000172606 329 ntBASIC12.13□□□□□ -0.47
Hoxb9P20615 Gm8018-201ENSMUST00000173536 789 ntBASIC12.13□□□□□ -0.47
Hoxb9P20615 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.13□□□□□ -0.47
Hoxb9P20615 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.13□□□□□ -0.47
Hoxb9P20615 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hoxb9P20615 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb9P20615 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hoxb9P20615 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxb9P20615 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.12□□□□□ -0.47
Hoxb9P20615 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm22018-201ENSMUST00000104357 131 ntBASIC12.12□□□□□ -0.47
Hoxb9P20615 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.12□□□□□ -0.47
Hoxb9P20615 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm24548-201ENSMUST00000158650 108 ntBASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.12□□□□□ -0.47
Hoxb9P20615 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxb9P20615 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxb9P20615 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxb9P20615 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxb9P20615 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm12502-201ENSMUST00000120197 444 ntBASIC12.11□□□□□ -0.47
Hoxb9P20615 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.11□□□□□ -0.47
Hoxb9P20615 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms