Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.68□□□□□ -0.06
Col1a1P11087 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Col1a1P11087 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
Col1a1P11087 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col1a1P11087 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Col1a1P11087 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col1a1P11087 Gm12857-201ENSMUST00000117678 592 ntBASIC14.67□□□□□ -0.06
Col1a1P11087 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.67□□□□□ -0.06
Col1a1P11087 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.67□□□□□ -0.06
Col1a1P11087 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.67□□□□□ -0.06
Col1a1P11087 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.67□□□□□ -0.06
Col1a1P11087 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col1a1P11087 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Col1a1P11087 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col1a1P11087 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.66□□□□□ -0.06
Col1a1P11087 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col1a1P11087 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Col1a1P11087 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.66□□□□□ -0.06
Col1a1P11087 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Col1a1P11087 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.66□□□□□ -0.06
Col1a1P11087 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Gm29155-201ENSMUST00000185910 269 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.66□□□□□ -0.06
Col1a1P11087 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Col1a1P11087 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.66□□□□□ -0.06
Col1a1P11087 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col1a1P11087 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.66□□□□□ -0.06
Col1a1P11087 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Col1a1P11087 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Col1a1P11087 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Gm26286-201ENSMUST00000104166 134 ntBASIC14.65□□□□□ -0.06
Col1a1P11087 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Col1a1P11087 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.65□□□□□ -0.06
Col1a1P11087 Mir1901-201ENSMUST00000122616 78 ntBASIC14.65□□□□□ -0.06
Col1a1P11087 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Col1a1P11087 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.65□□□□□ -0.06
Col1a1P11087 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.65□□□□□ -0.06
Col1a1P11087 Gm22144-201ENSMUST00000157402 102 ntBASIC14.65□□□□□ -0.06
Col1a1P11087 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.65□□□□□ -0.06
Col1a1P11087 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.65□□□□□ -0.06
Col1a1P11087 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col1a1P11087 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.65□□□□□ -0.06
Col1a1P11087 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col1a1P11087 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms