Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.42□□□□□ -0.26
Hoxc8P09025 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Hoxc8P09025 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc8P09025 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm23596-201ENSMUST00000104304 132 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm12165-201ENSMUST00000117047 342 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm12196-201ENSMUST00000120954 262 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxc8P09025 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Mir7677-201ENSMUST00000184226 67 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm5051-201ENSMUST00000204085 485 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Hoxc8P09025 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.41□□□□□ -0.26
Hoxc8P09025 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc8P09025 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc8P09025 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.4□□□□□ -0.26
Hoxc8P09025 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.4□□□□□ -0.26
Hoxc8P09025 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.4□□□□□ -0.26
Hoxc8P09025 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Hoxc8P09025 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.4□□□□□ -0.26
Hoxc8P09025 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc8P09025 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc8P09025 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm25881-201ENSMUST00000157783 103 ntBASIC13.39□□□□□ -0.27
Hoxc8P09025 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm8343-201ENSMUST00000182705 994 ntBASIC13.39□□□□□ -0.27
Hoxc8P09025 Gm27530-201ENSMUST00000184096 98 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms