Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trdmt1O55055 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm9062-201ENSMUST00000117712 727 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12616-201ENSMUST00000118594 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12624-201ENSMUST00000177615 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12621-201ENSMUST00000177760 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12615-201ENSMUST00000177970 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12622-201ENSMUST00000177975 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12627-201ENSMUST00000178412 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12625-201ENSMUST00000179122 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12614-201ENSMUST00000179586 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm12613-201ENSMUST00000180323 382 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm9211-201ENSMUST00000182882 975 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm28071-201ENSMUST00000190355 478 ntBASIC13.93□□□□□ -0.18
Trdmt1O55055 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trdmt1O55055 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trdmt1O55055 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.92□□□□□ -0.18
Trdmt1O55055 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.92□□□□□ -0.18
Trdmt1O55055 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm9550-201ENSMUST00000161130 862 ntBASIC13.92□□□□□ -0.18
Trdmt1O55055 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm9022-201ENSMUST00000182482 992 ntBASIC13.92□□□□□ -0.18
Trdmt1O55055 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.92□□□□□ -0.18
Trdmt1O55055 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.92□□□□□ -0.18
Trdmt1O55055 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trdmt1O55055 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trdmt1O55055 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.91□□□□□ -0.18
Trdmt1O55055 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Trdmt1O55055 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trdmt1O55055 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms