Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cxcl13O55038 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cxcl13O55038 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl13O55038 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.71□□□□□ -0.69
Cxcl13O55038 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm39404-201ENSMUST00000216350 313 ntBASIC10.71□□□□□ -0.69
Cxcl13O55038 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.71□□□□□ -0.69
Cxcl13O55038 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.71□□□□□ -0.69
Cxcl13O55038 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Cxcl13O55038 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.71□□□□□ -0.69
Cxcl13O55038 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cxcl13O55038 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cxcl13O55038 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.71□□□□□ -0.7
Cxcl13O55038 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cxcl13O55038 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cxcl13O55038 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Cxcl13O55038 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Cxcl13O55038 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cxcl13O55038 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cxcl13O55038 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cxcl13O55038 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cxcl13O55038 Gm12314-201ENSMUST00000118104 538 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms