Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Atf6F6VAN0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf6F6VAN0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf6F6VAN0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf6F6VAN0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Atf6F6VAN0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.02□□□□□ -0.32
Atf6F6VAN0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Atf6F6VAN0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.02□□□□□ -0.33
Atf6F6VAN0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm16177-201ENSMUST00000120728 718 ntBASIC13.02□□□□□ -0.33
Atf6F6VAN0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm10268-201ENSMUST00000085340 555 ntBASIC13.02□□□□□ -0.33
Atf6F6VAN0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.02□□□□□ -0.33
Atf6F6VAN0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.02□□□□□ -0.33
Atf6F6VAN0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Atf6F6VAN0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gm27682-201ENSMUST00000183930 110 ntBASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.01□□□□□ -0.33
Atf6F6VAN0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.01□□□□□ -0.33
Atf6F6VAN0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Atf6F6VAN0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms