Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Mir3960-201ENSMUST00000198213 73 ntBASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptpn4Q9WU22 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptpn4Q9WU22 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptpn4Q9WU22 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptpn4Q9WU22 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptpn4Q9WU22 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptpn4Q9WU22 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptpn4Q9WU22 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptpn4Q9WU22 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
Ptpn4Q9WU22 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptpn4Q9WU22 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.58■□□□□ 0.89
Ptpn4Q9WU22 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptpn4Q9WU22 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.58■□□□□ 0.88
Ptpn4Q9WU22 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ptpn4Q9WU22 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ptpn4Q9WU22 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptpn4Q9WU22 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptpn4Q9WU22 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptpn4Q9WU22 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Gm9812-201ENSMUST00000061934 968 ntBASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptpn4Q9WU22 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Scarna2-201ENSMUST00000157560 414 ntBASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptpn4Q9WU22 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptpn4Q9WU22 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptpn4Q9WU22 Gm45364-201ENSMUST00000210883 159 ntBASIC20.52■□□□□ 0.88
Ptpn4Q9WU22 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ptpn4Q9WU22 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptpn4Q9WU22 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ptpn4Q9WU22 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ptpn4Q9WU22 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Ptpn4Q9WU22 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ptpn4Q9WU22 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ptpn4Q9WU22 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ptpn4Q9WU22 Gm9806-201ENSMUST00000051080 552 ntBASIC20.51■□□□□ 0.87
Ptpn4Q9WU22 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.51■□□□□ 0.87
Ptpn4Q9WU22 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptpn4Q9WU22 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptpn4Q9WU22 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptpn4Q9WU22 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Gm11687-201ENSMUST00000118911 886 ntBASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.5■□□□□ 0.87
Ptpn4Q9WU22 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms